• Sarang S Dalal, Erik Edwards, Heidi E Kirsch, Nicholas M Barbaro, Robert T Knight, and Srikantan S Nagarajan.
• Biomagnetic Imaging Laboratory, Department of Radiology & Biomedical Imaging, University of California, San Francisco, CA 94143-0628, USA.
• J. Neurosci. Methods. 2008 Sep 15; 174 (1): 106-15.

AbstractIntracranial electroencephalography (iEEG) is clinically indicated for medically refractory epilepsy and is a promising approach for developing neural prosthetics. These recordings also provide valuable data for cognitive neuroscience research. Accurate localization of iEEG electrodes is essential for evaluating specific brain regions underlying the electrodes that indicate normal or pathological activity, as well as for relating research findings to neuroimaging and lesion studies. However, electrodes are frequently tucked underneath the edge of a craniotomy, inserted via a burr hole, or placed deep within the brain, where their locations cannot be verified visually or with neuronavigational systems. We show that one existing method, registration of postimplant computed tomography (CT) with preoperative magnetic resonance imaging (MRI), can result in errors exceeding 1cm. We present a novel method for localizing iEEG electrodes using routinely acquired surgical photographs, X-ray radiographs, and magnetic resonance imaging scans. Known control points are used to compute projective transforms that link the different image sets, ultimately allowing hidden electrodes to be localized, in addition to refining the location of manually registered visible electrodes. As the technique does not require any calibration between the different image modalities, it can be applied to existing image databases. The final result is a set of electrode positions on the patient's rendered MRI yielding locations relative to sulcal and gyral landmarks on individual anatomy, as well as MNI coordinates. We demonstrate the results of our method in eight epilepsy patients implanted with electrode grids spanning the left hemisphere.

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