Medical image analysis
-
Medical image analysis · Dec 2008
Groupwise surface correspondence by optimization: representation and regularization.
Groupwise optimization of correspondence across a set of unlabelled examples of shapes or images is a well-established technique that has been shown to produce quantitatively better models than other approaches. However, the computational cost of the optimization is high, leading to long convergence times. In this paper, we show how topologically non-trivial shapes can be mapped to regular grids, hence represented in terms of vector-valued functions defined on these grids (the shape image representation). ⋯ We also consider the question of regularization, and show that by borrowing ideas from image registration, it is possible to build a non-parametric, fluid regularizer for shapes, without losing the computational gain made by the use of shape images. We show that this non-parametric regularization leads to a further considerable gain, when compared to parametric regularization methods. Quantitative evaluation is performed on biological datasets, and shown to yield a substantial decrease in convergence time, with no loss of model quality.
-
Medical image analysis · Dec 2008
Unifying framework for multimodal brain MRI segmentation based on Hidden Markov Chains.
In the frame of 3D medical imaging, accurate segmentation of multimodal brain MR images is of interest for many brain disorders. However, due to several factors such as noise, imaging artifacts, intrinsic tissue variation and partial volume effects, tissue classification remains a challenging task. In this paper, we present a unifying framework for unsupervised segmentation of multimodal brain MR images including partial volume effect, bias field correction, and information given by a probabilistic atlas. ⋯ This atlas is considered as a complementary sensor and the proposed method is extended to multimodal brain MRI without any user-tunable parameter (unsupervised algorithm). To validate this new unifying framework, we present experimental results on both synthetic and real brain images, for which the ground truth is available. Comparison with other often used techniques demonstrates the accuracy and the robustness of this new Markovian segmentation scheme.